GSM980692: 2 d4 M2 sRNA; Mus musculus; RNA-Seq - SRA

SRX173221: GSM980692: 2 d4 M2 sRNA; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 43.7M spots, 1.7G bases, 932.5Mb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Small RNAs in undifferentiated and differentiating mouse embryonic stem cells

PRJNA171949 • SRP014691 • All experiments • All runs

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We report the identification of small RNAs in undifferentiated (d0) and differentiating (d4) mouse embryonic stem (ES) cells using high-throughput sequencing. The goal of this study was to identify small RNAs involved in X-chromosome inactivation (XCI). We have identified a subset of small RNAs that are generated from transposon sequences and map to the X-chromosome, suggesting their involvement in transposon control on the inactivating X-chromosome. Overall design: Examination of 5 small RNA and 4 RNA-seq libraries in 3 ES cell states.

Sample: 2 d4 M2 sRNA

SAMN01096990 • SRS353114 • All experiments • All runs

Organism: Mus musculus

Library:

Name: GSM980692: 2 d4 M2 sRNA

Instrument: Illumina Genome Analyzer IIx

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Spot descriptor:

1 forward

Experiment attributes:

GEO Accession: GSM980692

Links:

External link: GEO Sample

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 43.7M spots, 1.7G bases, 932.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR531828	43,661,422	1.7G	932.5Mb	2018-03-22

ID:: 214881

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